So just for the sake of laziness I asked CoPilot, and her is the stuff:
"Maritime Quarantine Protocols (Current Practice)

Pre‑arrival
• Maritime Declaration of Health (MDH) submitted before entering port.
• Yellow flag (“Q”) flown when requesting pratique (permission to enter).
• Crew health logs maintained for the voyage.

Arrival inspection
• Port health officers board the ship first.
• Temperature checks, symptom screening, documentation review.
• Isolation cabins used if illness is suspected.

Shipboard containment
• Ventilation control
• Restricted movement of crew
• Dedicated sanitation protocols
• Medical waste handling
• Testing and monitoring for incubation period.

Cargo handling
• Cargo is rarely quarantined today unless contaminated, but historically it was fumigated or held.

Granting pratique
• Issued once the ship is deemed safe.
• Without pratique, no one may disembark and no cargo may be unloaded."
and then a hard sci-fi re-imagining
"Hard‑SF Extrapolation: Quarantine in Space
Space adds new vectors and constraints:
Unique risks
• Xenobiology: Unknown pathogens with unknown incubation periods.
• Closed‑loop life support: Pathogens can spread through air, water, filters.
• Long‑duration voyages: Symptoms may appear mid‑transit.
• Planetary protection: Preventing contamination both ways.
Likely hard‑SF procedures
• Pre‑departure bioscans and immunization packages.
• Continuous environmental monitoring (air, water, surfaces).
• Isolation modules with independent life support.
• Docking quarantine: Ships remain sealed until cleared.
• Remote inspection drones to avoid exposing port personnel.
• Automated decontamination cycles: UV‑C, plasma sterilization, nanofilters.
• Planetary protection tiers (similar to NASA’s categories)."
Then finally I asked for Traveller specific
"Traveller Quarantine Protocols (Step‑by‑Step)
1. Pre‑Arrival Declaration
• Ship transmits Health Status Packet (HSP) 6 hours before arrival.
• Includes: crew biometrics, environmental logs, medbay reports, AI diagnostic summaries.
2. Approach Corridor Assignment
• Clean ships → standard corridor.
• Suspect ships → quarantine corridor with automated sensor arrays.
3. Docking & Inspection
• QL 0–1: Port medics board.
• QL 2–3: Remote drones board first; crew remains sealed.
• QL 4–5: No boarding; ship remains isolated.
4. Containment Measures
• Isolation pods activated.
• Airlock seals verified.
• Life‑support filters locked for sampling.
5. Clearance or Escalation
• Clearance → pratique granted.
• Escalation → ship moved to quarantine orbit or isolation bay."
I am now looking at doing my own Traveller based procedure based on the real world ships and a bit of input from the other two, this will take a bit longer...